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PCR Plates for High-Throughput Amplification Workflows

 

PCR plates are 96-well or 384-well thin-wall polypropylene vessels used in high-throughput end-point PCR, qPCR, and genotyping, available in fully-skirted (robot-compatible), semi-skirted (balanced stability), and non-skirted (cycler-universal) formats. Standard-profile 0.2 mL and low-profile 0.1 mL well geometries cover both conventional and fast-block thermal cyclers.

MBP Inc. supplies PCR plates to procurement teams at research institutions, including MD Anderson Cancer Center and Howard Hughes Medical Institute, with Quick Order and PO options for recurring lab supplies across the USA and Canada. Contact customerservice@mbpinc.net to request a quote today!

PCR Plates

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What Are PCR Plates?


PCR plates are single-use, thin-wall polypropylene multi-well vessels designed for the thermal cycling demands of PCR, qPCR, RT-PCR, and genotyping. The 96-well format (12 columns × 8 rows) is the standard for most research and clinical labs; 384-well plates serve ultra-high-throughput applications. Well volumes are 0.2 mL (standard profile) for conventional block cyclers or 0.1 mL (low profile) for fast-block instruments. The skirt — the rigid plastic border surrounding the well array — determines automation compatibility, cycler lid clearance, and plate rigidity. 

 

What you will find:

 

 


How to Choose PCR Plates


Skirt Format
Fully-skirted plates have a full-height ANSI/SBS-compliant border (127.76 × 85.47 mm footprint) and are required for robotic liquid handlers (Hamilton STAR, Tecan EVO, PerkinElmer JANUS) and automated stackers. Semi-skirted plates have a partial skirt providing enough rigidity for multichannel pipetting while maintaining thermal cycler block compatibility across a wider range of instruments. Non-skirted plates have no border and fit virtually any cycler block, including instruments whose compression lids would be obstructed by a full skirt.

Well Profile: Standard vs Low-Profile
Standard-profile 0.2 mL wells are used with conventional (tall) block cyclers. Low-profile 0.1 mL wells are required for fast-block instruments, including the Applied Biosystems QuantStudio, Bio-Rad CFX96 Fast, and Roche LightCycler 480, where the reduced well depth shortens the thermal path to the sample.

Colour: Clear, White, or Black
Clear plates allow visual inspection of well volumes and are the default for end-point PCR. White plates increase qPCR sensitivity in bottom-read optical systems by reflecting fluorescence emission back through the detector. Black plates reduce background fluorescence in probe-based assays where cross-well optical interference is a concern.

Sealing Compatibility
Skirted and semi-skirted plates seal reliably with adhesive films and heat sealers; the rigid skirt supports even film application and reduces edge-well evaporation. Non-skirted plates require cap mats or adhesive seals that adhere directly to the well rim.


Specifications Context


PCR plates are moulded from virgin, low-extractable medical-grade polypropylene; well walls are uniformly thin (typically 0.25–0.35 mm) to maximise thermal conductivity. ANSI/SBS footprint standard (127.76 × 85.47 mm) applies to skirted plates for instrument interoperability. Plates are certified DNase-free, RNase-free, human DNA-free, and PCR inhibitor-free per lot. Cut corners (typically at H1/A12 position) and alpha-numeric well labelling aid plate orientation.Thermo Fisher SuperPlate skirted formats are the leading references for robotic applications; semi-skirted plates from Sorenson and equivalent lines serve the broad research market. 

Connect with the MBP team today to request a quote and find the perfect PCR plate configuration for your lab's specific needs.

FAQ

Skirted PCR plates have a full-height ANSI/SBS border for robotic handling and automation compatibility. Semi-skirted plates have a partial skirt providing rigidity for multichannel pipetting while fitting a wider range of thermal cycler blocks. Non-skirted plates have no border and fit virtually any cycler block, including instruments whose compression lids would be blocked by a full skirt.
Fully-skirted 96-well PCR plates with an ANSI/SBS footprint (127.76 × 85.47 mm) are the required format for robotic liquid handlers such as Hamilton STAR, Tecan EVO, and PerkinElmer JANUS. The rigid skirt provides the even surface needed for robotic arm gripping and plate stacking.
Standard 0.2 mL (standard-profile) wells are used with conventional tall-block thermal cyclers such as the Bio-Rad T100 and Eppendorf Mastercycler. Low-profile 0.1 mL wells are required for fast-block instruments including the Applied Biosystems QuantStudio, Bio-Rad CFX96 Fast, and Roche LightCycler 480.
White polypropylene PCR plates improve fluorescence signal detection in qPCR instruments with bottom-read optical configurations by reflecting emission back through the detector, increasing sensitivity. Clear plates are preferred for top-read instruments and for end-point PCR where visual well inspection is needed.
Skirted and semi-skirted PCR plates are compatible with adhesive sealing films, heat seals, and optical films applied with a plate sealer; the rigid skirt supports even sealing and reduces edge-well evaporation during cycling. Non-skirted plates require cap mats or adhesive films applied directly to the well rim.
PCR plates stocked by MBP Inc. are independently certified DNase-free, RNase-free, human DNA-free, and PCR inhibitor-free on a per-lot basis. Plates are manufactured from low-extractable virgin polypropylene to prevent leaching of inhibitory compounds into PCR reactions.
The ANSI/SBS microplate footprint standard specifies 127.76 mm × 85.47 mm external plate dimensions and standardised well spacing. Fully-skirted PCR plates conforming to this standard are interoperable with standard thermal cyclers, liquid handlers, plate readers, and automated stackers without adapters.
Non-skirted 96-well plates with 0.1 mL or 0.2 mL wells are compatible with most qPCR instruments, including the Bio-Rad CFX96 and Applied Biosystems QuantStudio series, which accept plates without a full skirt in their standard configuration. Confirm instrument block geometry and lid clearance before selecting a non-skirted plate.
A standard case of 96-well PCR plates contains 25 or 50 plates depending on the supplier; fully-skirted plates are typically sold in cases of 25, while semi-skirted and non-skirted plates may come 50 per case. MBP Inc. offers case pricing; contact the team or use Quick Order for volume orders.
MBP Inc. accepts purchase orders for PCR plates and provides a Quick Order tool for recurring lab supplies. MBP is a registered vendor at MD Anderson Cancer Center and Howard Hughes Medical Institute, supporting institutional PO processing for procurement teams.
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